Publication highlights

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Explore a selection of research case studies from the past five years.

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Intro

Researchers at the Crick are tackling the big questions about human health and disease, and new findings are published every week.

Our faculty have picked some of the most significant papers published by Crick scientists, all of which are freely available thanks to our open science policy.

Highlights

Cryptosporidium

CRISPR screens unlocked for the Cryptosporidium parasite

Researchers at the Crick have developed a CRISPR-based screening method to rapidly assess how the loss of individual Cryptosporidium genes influence parasite survival in vivo. Using this method, they examined the parasite’s pyrimidine salvage pathway and a set of leading Cryptosporidium vaccine candidates. This targeted screening method is highly versatile and will enable researchers to more rapidly expand the knowledge base for Cryptosporidium infection biology.

Targeted CRISPR screens reveal genes essential for Cryptosporidium survival in the host intestine

Published in Nature Communications

Published

Histopathology image of the mouse ileum infected with Cryptosporidium

Repurposing an abandoned drug may help treat a neglected parasitic infection

Researchers have mapped the human metabolic pathways that Cryptosporidium, an intestinal parasite, requires to survive. They conducted a genome-scale screening experiment that involves systematically disabling nearly every protein-coding gene, individually, from human intestinal cells, before infecting the cells with Cryptosporidium. The team found that genes involved in making cholesterol appeared to have opposing effects - some boosting infection and others blocking it. This balance hinged on a molecule midway through the cholesterol production line, squalene. This molecule protects against oxidative stress by stimulating the production of glutathione, which Cryptosporidium needs but cannot make. This leaves the parasite dependent on glutathione from the host cell, a dependency which can be targeted with a high cholesterol drug called lapaquistat. This drug reduced infection in a mouse model of disease and completely blocked intestinal damage, suggesting it could be repurposed to fight Cryptosporidium.

The essential host genome for Cryptosporidium survival exposes metabolic dependencies that can be leveraged for treatment

Published in Cell

Published

Cryptosporidium in vacuoles on the epithelial surface

Researchers uncover how intestinal parasite Cryptosporidium alters host cells

Researchers have shown that the Cryptosporidium parasite exports a protein into infected intestinal cells, altering the gut environment and enabling the parasite to survive and replicate. They investigated a major protein in a family of exported proteins, called microvilli protein 1 (MVP1), finding that, within the epithelial cell, it interacts with human proteins that are responsible for maintaining structure and regulating cellular projections like microvilli. One of the proteins that MVP1 interacts with, called EBP50, is crucial for stabilising pumps on the surface of the cells that bring salts in. Disrupting these pumps results in diarrhoea, so the team believes that MVP1 might be one of the key factors that drive the symptoms caused by Cryptosporidium. They also found that MVP1 interacts with the same structural proteins as the Map protein, exported by the E. Coli bacteria, which also causes microvilli elongation.

Cryptosporidium modifies intestinal microvilli through an exported virulence factor

Published in Cell Host and Microbe

Published

Protrusions inside the small intestine of a mouse with a weakened immune system. Green shows the locations of the Cryptosporidium parasite.

Common dietary supplement could protect against Cryptosporidium parasite infection

Researchers at the Francis Crick Institute have discovered that a common dietary supplement could protect against chronic Cryptosporidium infections which are particularly prevalent in children under two and in areas with poorer sanitation. The researchers exposed mice to the Cryptosporidium parasite and observed that infection triggered an expansion of immune cells in the intestinal epithelium, which are part of the first line of defence against the parasite. When these CD8+ T cells were transferred to mice with weakened immune systems, the researchers saw that the mice were now able to fight off Cryptosporidium infection. Mice that lack the AHR receptor, or healthy mice fed a diet specifically deficient in indoles, had a reduced population of intestinal CD8+ T cells. This meant the mice were less able to fight off the infection, and showed that CD8+ T cells are reliant on the AHR system to protect the intestine.

Dietary environmental factors shape the immune defense against Cryptosporidium infection

Published in Cell Host and Microbe

Published

COVID testing

Pandemic peak SARS-CoV-2 infection and seroconversion rates in London frontline health-care workers

This important paper showed very high levels of infection amongst healthcare workers in a local hospital. It has influenced government policy – asymptomatic healthcare workers are to be screened as per our recommendation (announced October 12th).

View the publication

Published in The Lancet

Published